GUIDESMPS ProtocolsTechnical Methods
Practical Guide

Organ-on-Chip Protocols

Technical Methods for Microphysiological Systems

← Back to Guides

CHIP PREPARATION

Organ-on-chip success begins with proper surface preparation. PDMS chips require plasma treatment or ECM coating (collagen I, fibronectin, or Matrigel) to enable cell attachment. Coat channels with 50-100 μg/mL ECM protein overnight at 4°C, then aspirate excess before cell seeding. Verify channel patency with media flush.

CELL SEEDING PROTOCOL

  • Density: Typically 1-5 × 10⁶ cells/mL depending on channel dimensions
  • Method: Inject cell suspension slowly to avoid air bubbles and shear damage
  • Attachment: Invert chips or use static culture 2-4 hours for ceiling seeding
  • Multi-layer: Seed endothelium first, allow attachment, then epithelium on membrane
  • Verification: Image 24h post-seeding to confirm confluence and morphology

FLOW OPTIMIZATION

  • Shear Stress: 0.1-1 dyn/cm² for endothelium, lower for epithelium
  • Flow Rate: Calculate from channel dimensions and target shear stress
  • Pulsatility: Peristaltic pumps provide physiological pulsatile flow
  • Bubble Prevention: Degas media, use bubble traps, prime tubing completely
  • Ramp-Up: Start static, increase flow gradually over 24-48h

ASSAY READOUTS

Common readouts include barrier function (TEER measurement, permeability), effluent analysis (albumin, urea, cytokines by ELISA), imaging (live/dead, immunofluorescence), and functional assays (CYP450 activity, transporter function). Establish baseline measurements before compound exposure for proper controls.

RELATED
← Organoid Guide
NEXT
Drug Testing Methods →
← Guides Hub